STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004947annotation not available (102 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
   
   0.759
ENSPCAP00000010666
annotation not available
   
 0.698
ENSPCAP00000010334
annotation not available
   
 
 0.591
RSPH9
Radial spoke head component 9.
   
 
 0.580
ENSPCAP00000008894
annotation not available
      
 0.550
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.536
RSPH4A
Radial spoke head component 4A.
   
 
 0.531
RSPH6A
Radial spoke head 6 homolog A.
   
 
 0.531
MNS1
Meiosis specific nuclear structural 1.
    
 
 0.527
ENSPCAP00000010568
annotation not available
   
 
 0.519
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.