Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTPRZ1Protein tyrosine phosphatase receptor type Z1. (2335 aa)    
Predicted Functional Partners:
BCAN
Brevican.
   
 0.946
CNTN1
Contactin 1.
   
 
 0.940
IL34
Interleukin 34.
    
 0.915
APOB
Apolipoprotein B.
    
 0.889
ENSPCAP00000013862
annotation not available
    
 0.853
ITGAV
Integrin subunit alpha V.
    
  0.833
PTPN7
Protein tyrosine phosphatase non-receptor type 7.
    
 0.804
PTPRR
Protein tyrosine phosphatase receptor type R.
    
 0.804
ENSPCAP00000013994
annotation not available
    
 0.804
ENSPCAP00000009332
annotation not available
    
 0.795
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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