close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG4AAutophagy related 4A cysteine peptidase. (424 aa)    
Predicted Functional Partners:
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.990
GABARAP
GABA type A receptor-associated protein.
   
 0.990
ENSPCAP00000012454
annotation not available
   
 0.957
ULK1
Unc-51 like autophagy activating kinase 1.
   
 
 0.903
ENSPCAP00000010105
annotation not available
   
 
 0.903
ENSPCAP00000000913
annotation not available
   
 0.864
ENSPCAP00000002915
annotation not available
   
 0.864
ATG3
Autophagy related 3.
   
 
 0.817
ATG4C
Autophagy related 4C cysteine peptidase.
     
0.801
ATG4B
Autophagy related 4B cysteine peptidase.
  
  
0.801
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.