Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRP68Signal recognition particle 68. (617 aa)    
Predicted Functional Partners:
SRP19
Signal recognition particle 19.
   
 0.999
SRP54
Signal recognition particle 54.
   
 0.999
SRP72
Signal recognition particle 72.
   
 0.999
SRP14
Signal recognition particle 14.
    
 0.999
SRP9
Signal recognition particle 9.
   
 0.999
RPL3
Ribosomal protein L3.
   
 
 0.962
ENSPCAP00000000904
annotation not available
   
   0.918
ENSPCAP00000003574
annotation not available
   
 0.918
PUM3
Pumilio RNA binding family member 3.
   
   0.904
SRPRB
SRP receptor subunit beta.
   
 
 0.882
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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