Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CTNNBL1Catenin beta like 1. (559 aa)    
Predicted Functional Partners:
PRPF19
pre-mRNA processing factor 19.
   
 0.999
CDC5L
Cell division cycle 5 like.
   
 0.998
PLRG1
Pleiotropic regulator 1.
   
 0.998
BCAS2
BCAS2 pre-mRNA processing factor.
   
 0.998
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.997
CWC15
CWC15 spliceosome associated protein homolog.
    
 0.997
ENSPCAP00000014719
annotation not available
    
 0.992
XAB2
XPA binding protein 2.
   
 0.988
RBM22
RNA binding motif protein 22.
   
 0.982
BUD31
BUD31 homolog.
    
 
 0.978
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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