Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000004989annotation not available (107 aa)    
Predicted Functional Partners:
GCH1
GTP cyclohydrolase 1.
  
 
 0.945
ENSPCAP00000006005
annotation not available
     
  0.850
ALPL
Alkaline phosphatase, biomineralization associated.
     
  0.850
CBR1
Carbonyl reductase 1.
    
 0.826
CBR3
Carbonyl reductase 3.
    
 0.826
GCHFR
GTP cyclohydrolase I feedback regulator.
     
 0.779
PRKG2
Protein kinase cGMP-dependent 2.
   
  0.740
ENSPCAP00000001879
annotation not available
    
  0.718
ENSPCAP00000009964
annotation not available
    
  0.718
AKR1B1
Aldo-keto reductase family 1 member B.
    
  0.718
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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