STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THBS4Thrombospondin 4. (964 aa)    
Predicted Functional Partners:
ENSPCAP00000013862
annotation not available
    
 0.918
CD36
CD36 molecule.
    
 0.914
ITGB1
Integrin subunit beta 1.
    
 0.913
SDC1
Syndecan 1.
    
 0.911
CD47
CD47 molecule.
   
 
 0.909
ITGA3
Integrin subunit alpha 3.
    
 0.901
ITGAV
Integrin subunit alpha V.
    
  0.901
ENSPCAP00000000329
annotation not available
     
 0.892
THBS3
Thrombospondin 3.
  
 
0.865
ITGB7
Integrin subunit beta 7.
    
 0.833
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.