Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PACS1Phosphofurin acidic cluster sorting protein 1. (944 aa)    
Predicted Functional Partners:
WDR37
WD repeat domain 37.
    
 
 0.982
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
    
 
 0.792
SNX24
Sorting nexin 24.
    
   0.706
LEAP2
Liver enriched antimicrobial peptide 2.
    
   0.686
MRPL38
Mitochondrial ribosomal protein L38.
      
 0.584
ENSPCAP00000012873
annotation not available
      
 0.575
ENSPCAP00000007574
annotation not available
      
 0.570
CPD
Carboxypeptidase D.
      
 0.564
PKD2
Polycystin 2, transient receptor potential cation channel.
      
 0.563
ITK
IL2 inducible T cell kinase.
      
 0.560
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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