Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBM6RNA binding motif protein 6. (1103 aa)    
Predicted Functional Partners:
SUGP1
SURP and G-patch domain containing 1.
   
 0.956
DHX15
DEAH-box helicase 15.
   
 0.909
SF3B4
Splicing factor 3b subunit 4.
    
 
 0.863
PRPF19
pre-mRNA processing factor 19.
   
 
 0.863
IK
IK cytokine.
   
  0.847
U2SURP
U2 snRNP associated SURP domain containing.
   
 
 0.847
ENSPCAP00000003432
annotation not available
   
 0.842
CCAR1
Cell division cycle and apoptosis regulator 1.
   
 0.842
ENSPCAP00000013460
annotation not available
   
 0.842
PTBP2
Polypyrimidine tract binding protein 2.
    
 0.839
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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