Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOLPH3Golgi phosphoprotein 3. (298 aa)    
Predicted Functional Partners:
GOLPH3L
Golgi phosphoprotein 3 like.
   
   0.985
GMPPB
GDP-mannose pyrophosphorylase B.
    
 
 0.952
MYO18A
Myosin XVIIIA.
    
 
 0.900
COPB1
Coatomer protein complex subunit beta 1.
    
 
 0.894
ARCN1
Archain 1.
   
 
 0.885
COPA
Coatomer protein complex subunit alpha.
    
 
 0.883
DIPK2A
Divergent protein kinase domain 2A.
    
   0.815
COPB2
Coatomer protein complex subunit beta 2.
    
 
 0.813
SEC24B
SEC24 homolog B, COPII coat complex component.
      
 0.769
COPE
Coatomer protein complex subunit epsilon.
   
 
 0.746
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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