Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CIB3Calcium and integrin binding family member 3. (187 aa)    
Predicted Functional Partners:
TMC2
Transmembrane channel like 2.
    
 0.905
TMC1
Transmembrane channel like 1.
    
 0.844
BRICD5
BRICHOS domain containing 5.
      
 0.825
ZPLD1
Zona pellucida like domain containing 1.
      
 0.777
TMC3
Transmembrane channel like 3.
    
 0.772
ODF3L2
Outer dense fiber of sperm tails 3 like 2.
    
 
 0.693
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
     
 0.668
NIN
Ninein.
    
 0.666
NR2C2AP
Nuclear receptor 2C2 associated protein.
    
 0.658
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 0.654
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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