STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSD4Pleckstrin and Sec7 domain containing 4. (1012 aa)    
Predicted Functional Partners:
ARL14
ADP ribosylation factor like GTPase 14.
    
 
 0.681
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
     
 0.633
ENSPCAP00000008602
annotation not available
  
   
 0.625
CYTH4
Cytohesin 4.
     
 0.585
IQSEC2
IQ motif and Sec7 domain ArfGEF 2.
     
 0.575
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
     
 0.544
ARFGEF2
ADP ribosylation factor guanine nucleotide exchange factor 2.
     
 0.544
ARF6
ADP ribosylation factor 6.
    
 
 0.543
AGBL2
ATP/GTP binding protein like 2.
      
 0.522
IQSEC3
IQ motif and Sec7 domain ArfGEF 3.
   
 
 0.516
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.