STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC40A1Solute carrier family 40 member 1. (469 aa)    
Predicted Functional Partners:
HAMP
Hepcidin antimicrobial peptide.
    
 
 0.946
HEPHL1
Hephaestin like 1.
    
 0.919
CP
Ceruloplasmin.
    
 0.913
ENSPCAP00000003113
annotation not available
    
 0.730
F5
Coagulation factor V.
    
 0.730
RS1
Retinoschisin 1.
    
 0.717
SLC11A2
Solute carrier family 11 member 2.
      
 0.585
TFR2
Transferrin receptor 2.
      
 0.541
CYBRD1
Cytochrome b reductase 1.
      
 0.530
TFRC
Transferrin receptor.
      
 0.528
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.