Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAD54LRAD54 like. (741 aa)    
Predicted Functional Partners:
RAD51
RAD51 recombinase.
  
 
 0.987
PFDN5
Prefoldin subunit 5.
    
 
 0.955
RAD52
RAD52 homolog, DNA repair protein.
    
 
 0.925
ENSPCAP00000015746
annotation not available
  
 
0.916
ENSPCAP00000010722
annotation not available
   
 0.898
NDUFA9
NADH:ubiquinone oxidoreductase subunit A9.
   
   0.897
FBH1
F-box DNA helicase 1.
   
 
 0.863
WRN
WRN RecQ like helicase.
  
 
 0.863
ENSPCAP00000002180
annotation not available
  
 
 0.862
MUS81
MUS81 structure-specific endonuclease subunit.
   
 0.860
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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