Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000005071annotation not available (418 aa)    
Predicted Functional Partners:
THRSP
Thyroid hormone responsive.
    
  0.609
IFI30
IFI30 lysosomal thiol reductase.
    
  0.546
FAM166B
Family with sequence similarity 166 member B.
    
  0.546
ENSPCAP00000005593
annotation not available
     
 0.519
PALB2
Partner and localizer of BRCA2.
     
  0.476
MRPL20
Mitochondrial ribosomal protein L20.
     
  0.455
MRPL19
Mitochondrial ribosomal protein L19.
     
  0.455
MRPL41
Mitochondrial ribosomal protein L41.
     
  0.455
MRPL46
Mitochondrial ribosomal protein L46.
     
  0.455
MRPL42
Mitochondrial ribosomal protein L42.
     
  0.455
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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