STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEFF2Transmembrane protein with EGF like and two follistatin like domains 2. (231 aa)    
Predicted Functional Partners:
MAD2L2
Mitotic arrest deficient 2 like 2.
    
   0.550
ENSPCAP00000013232
annotation not available
    
 0.524
GDF3
Growth differentiation factor 3.
    
 0.493
ENSPCAP00000012178
annotation not available
    
 0.493
PIBF1
Progesterone immunomodulatory binding factor 1.
      
 0.475
TGFB2
Transforming growth factor beta 2.
    
 0.472
GDF10
Growth differentiation factor 10.
    
 0.470
ENSPCAP00000002433
annotation not available
    
 0.467
ENSPCAP00000011031
annotation not available
    
 0.467
BMP4
Bone morphogenetic protein 4.
    
 0.461
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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