STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK5RAP1CDK5 regulatory subunit associated protein 1. (588 aa)    
Predicted Functional Partners:
EXOSC3
Exosome component 3.
    
 
 0.949
EXOSC5
Exosome component 5.
   
   0.923
ENDOV
Endonuclease V.
  
 
 0.872
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
   
 
 0.675
TRIT1
tRNA isopentenyltransferase 1.
  
  
 0.664
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
  
 0.625
EXOSC6
Exosome component 6.
   
   0.605
EXOSC4
Exosome component 4.
   
   0.605
MRPS9
Mitochondrial ribosomal protein S9.
  
  
 0.592
MRPS12
Mitochondrial ribosomal protein S12.
  
  
 0.591
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.