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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000005151annotation not available (285 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.978
POLG
DNA polymerase gamma, catalytic subunit.
   
 
 0.968
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.961
IARS1
isoleucyl-tRNA synthetase 1.
 
 
 0.850
MARS1
methionyl-tRNA synthetase 1.
  
 
 0.816
LARS1
leucyl-tRNA synthetase 1.
  
 
 0.804
VARS1
valyl-tRNA synthetase 1.
  
 
 0.784
AARS2
alanyl-tRNA synthetase 2, mitochondrial.
  
 
 0.763
AARS1
alanyl-tRNA synthetase 1.
  
 
 0.763
LARS2
leucyl-tRNA synthetase 2, mitochondrial.
  
 
 0.756
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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