STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS26CVPS26 endosomal protein sorting factor C. (270 aa)    
Predicted Functional Partners:
VPS29
VPS29 retromer complex component.
   
 
 0.875
CCDC22
Coiled-coil domain containing 22.
   
 
 0.858
CCDC93
Coiled-coil domain containing 93.
    
 
 0.846
COMMD2
COMM domain containing 2.
    
 
 0.819
COMMD4
COMM domain containing 4.
    
 
 0.812
ENSPCAP00000015369
annotation not available
    
 
 0.799
COMMD1
Copper metabolism domain containing 1.
    
 
 0.795
VPS35L
VPS35 endosomal protein sorting factor like.
   
 
 0.786
DENND10
DENN domain containing 10.
    
 
 0.770
COMMD10
COMM domain containing 10.
    
 
 0.705
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.