STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RWDD2BRWD domain containing 2B. (313 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
  0.739
KCTD2
Potassium channel tetramerization domain containing 2.
    
  0.739
RWDD1
RWD domain containing 1.
      
 0.538
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
  0.523
USP16
Ubiquitin specific peptidase 16.
      
 0.497
SAE1
SUMO1 activating enzyme subunit 1.
    
 0.490
UBA2
Ubiquitin like modifier activating enzyme 2.
    
  0.438
ENSPCAP00000003013
annotation not available
      
 0.424
SUMO1
Small ubiquitin like modifier 1.
   
 0.421
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.