STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC82Coiled-coil domain containing 82. (511 aa)    
Predicted Functional Partners:
ENSPCAP00000001567
annotation not available
      
 0.692
LRRC2
Leucine rich repeat containing 2.
      
 0.589
ENSPCAP00000005711
annotation not available
      
 0.566
C11orf54
Chromosome 11 open reading frame 54.
      
 0.565
ENSPCAP00000008006
annotation not available
      
 0.564
PMS1
PMS1 homolog 1, mismatch repair system component.
      
 0.564
TBC1D22B
TBC1 domain family member 22B.
      
 0.563
ASPHD1
Aspartate beta-hydroxylase domain containing 1.
      
 0.492
POGK
Pogo transposable element derived with KRAB domain.
      
 0.486
LIG1
DNA ligase 1.
      
 0.479
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.