STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000005167annotation not available (59 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
    
 0.981
UBXN6
UBX domain protein 6.
    
 0.906
NSFL1C
NSFL1 cofactor.
     
 0.902
UBXN2A
UBX domain protein 2A.
     
 0.902
UBXN1
UBX domain protein 1.
     
 0.901
ENSPCAP00000003689
annotation not available
     
 0.892
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 0.885
ENSPCAP00000013714
annotation not available
    
 0.885
UBXN4
UBX domain protein 4.
     
 0.885
FAAP100
FA core complex associated protein 100.
    
 0.860
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.