ENSPCAP00000005183 protein (Procavia capensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSPCAP00000005183

annotation not available (374 aa)

Predicted Functional Partners:

TSPYL2

0.862

ZMYND8

0.796

DDX24

0.697

ENSPCAP00000001093

0.646

ANP32E

0.646

ANP32B

0.646

SMC6

0.547

ASF1B

0.540

ASF1A

0.540

BARD1

0.518

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANP32B	ANP32E	ENSPCAP00000015303	ENSPCAP00000006747	Acidic nuclear phosphoprotein 32 family member B.	Acidic nuclear phosphoprotein 32 family member E.	0.901
ANP32B	ENSPCAP00000001093	ENSPCAP00000015303	ENSPCAP00000001093	Acidic nuclear phosphoprotein 32 family member B.	annotation not available	0.901
ANP32B	ENSPCAP00000005183	ENSPCAP00000015303	ENSPCAP00000005183	Acidic nuclear phosphoprotein 32 family member B.	annotation not available	0.646
ANP32B	TSPYL2	ENSPCAP00000015303	ENSPCAP00000000388	Acidic nuclear phosphoprotein 32 family member B.	TSPY like 2.	0.754
ANP32E	ANP32B	ENSPCAP00000006747	ENSPCAP00000015303	Acidic nuclear phosphoprotein 32 family member E.	Acidic nuclear phosphoprotein 32 family member B.	0.901
ANP32E	ENSPCAP00000005183	ENSPCAP00000006747	ENSPCAP00000005183	Acidic nuclear phosphoprotein 32 family member E.	annotation not available	0.646
ANP32E	TSPYL2	ENSPCAP00000006747	ENSPCAP00000000388	Acidic nuclear phosphoprotein 32 family member E.	TSPY like 2.	0.754
ASF1A	ASF1B	ENSPCAP00000013836	ENSPCAP00000001511	Anti-silencing function 1A histone chaperone.	Anti-silencing function 1B histone chaperone.	0.962
ASF1A	ENSPCAP00000005183	ENSPCAP00000013836	ENSPCAP00000005183	Anti-silencing function 1A histone chaperone.	annotation not available	0.540
ASF1A	TSPYL2	ENSPCAP00000013836	ENSPCAP00000000388	Anti-silencing function 1A histone chaperone.	TSPY like 2.	0.549
ASF1B	ASF1A	ENSPCAP00000001511	ENSPCAP00000013836	Anti-silencing function 1B histone chaperone.	Anti-silencing function 1A histone chaperone.	0.962
ASF1B	ENSPCAP00000005183	ENSPCAP00000001511	ENSPCAP00000005183	Anti-silencing function 1B histone chaperone.	annotation not available	0.540
ASF1B	TSPYL2	ENSPCAP00000001511	ENSPCAP00000000388	Anti-silencing function 1B histone chaperone.	TSPY like 2.	0.549
BARD1	ENSPCAP00000005183	ENSPCAP00000014180	ENSPCAP00000005183	BRCA1 associated RING domain 1.	annotation not available	0.518
BARD1	SMC6	ENSPCAP00000014180	ENSPCAP00000011926	BRCA1 associated RING domain 1.	Structural maintenance of chromosomes 6.	0.604
BARD1	TSPYL2	ENSPCAP00000014180	ENSPCAP00000000388	BRCA1 associated RING domain 1.	TSPY like 2.	0.606
DDX24	ENSPCAP00000005183	ENSPCAP00000002704	ENSPCAP00000005183	DEAD-box helicase 24.	annotation not available	0.697
DDX24	TSPYL2	ENSPCAP00000002704	ENSPCAP00000000388	DEAD-box helicase 24.	TSPY like 2.	0.697
DDX24	ZMYND8	ENSPCAP00000002704	ENSPCAP00000005826	DEAD-box helicase 24.	Zinc finger MYND-type containing 8.	0.688
ENSPCAP00000001093	ANP32B	ENSPCAP00000001093	ENSPCAP00000015303	annotation not available	Acidic nuclear phosphoprotein 32 family member B.	0.901