STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MON1AMON1 homolog A, secretory trafficking associated. (554 aa)    
Predicted Functional Partners:
ENSPCAP00000002280
annotation not available
    
 0.977
VPS41
VPS41 subunit of HOPS complex.
    
 
 0.902
RAB9A
RAB9A, member RAS oncogene family.
    
 0.859
RAB9B
RAB9B, member RAS oncogene family.
    
 0.859
ENSPCAP00000010666
annotation not available
    
 
 0.673
ENSPCAP00000012541
annotation not available
    
 0.664
GDI1
GDP dissociation inhibitor 1.
    
 0.664
VPS11
VPS11 core subunit of CORVET and HOPS complexes.
    
 
 0.656
VPS39
VPS39 subunit of HOPS complex.
   
 
 0.651
ENSPCAP00000002798
annotation not available
    
 0.583
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.