STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000005193annotation not available (320 aa)    
Predicted Functional Partners:
NDUFA2
NADH:ubiquinone oxidoreductase subunit A2.
   
    0.658
COPS3
COP9 signalosome subunit 3.
    
   0.613
ENSPCAP00000013557
annotation not available
   
 
 0.500
ENSPCAP00000013873
annotation not available
    
   0.472
ENSPCAP00000005259
annotation not available
    
 
 0.421
ENSPCAP00000009504
annotation not available
    
 
 0.421
ATP5MD
ATP synthase membrane subunit DAPIT.
   
    0.420
POLR2L
RNA polymerase II subunit L.
   
    0.406
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.