STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRIP1BRCA1 interacting protein C-terminal helicase 1. (1211 aa)    
Predicted Functional Partners:
SLF1
SMC5-SMC6 complex localization factor 1.
  
 0.996
WRN
WRN RecQ like helicase.
  
 0.991
ENSPCAP00000012584
annotation not available
   
 0.989
MLH1
mutL homolog 1.
   
 0.988
TOPBP1
DNA topoisomerase II binding protein 1.
   
 0.987
PMS2
PMS1 homolog 2, mismatch repair system component.
   
 0.969
BARD1
BRCA1 associated RING domain 1.
  
 0.950
ENSPCAP00000010342
annotation not available
    
 0.947
GTF2H1
General transcription factor IIH subunit 1.
    
 0.947
GTF2H3
General transcription factor IIH subunit 3.
    
 0.946
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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