Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BARD1 | BRIP1 | ENSPCAP00000014180 | ENSPCAP00000005209 | BRCA1 associated RING domain 1. | BRCA1 interacting protein C-terminal helicase 1. | 0.950 |
BARD1 | ENSPCAP00000012584 | ENSPCAP00000014180 | ENSPCAP00000012584 | BRCA1 associated RING domain 1. | annotation not available | 0.999 |
BARD1 | MLH1 | ENSPCAP00000014180 | ENSPCAP00000006159 | BRCA1 associated RING domain 1. | mutL homolog 1. | 0.748 |
BARD1 | PMS2 | ENSPCAP00000014180 | ENSPCAP00000003777 | BRCA1 associated RING domain 1. | PMS1 homolog 2, mismatch repair system component. | 0.544 |
BARD1 | SLF1 | ENSPCAP00000014180 | ENSPCAP00000003732 | BRCA1 associated RING domain 1. | SMC5-SMC6 complex localization factor 1. | 0.998 |
BARD1 | TOPBP1 | ENSPCAP00000014180 | ENSPCAP00000011418 | BRCA1 associated RING domain 1. | DNA topoisomerase II binding protein 1. | 0.981 |
BARD1 | WRN | ENSPCAP00000014180 | ENSPCAP00000013009 | BRCA1 associated RING domain 1. | WRN RecQ like helicase. | 0.995 |
BRIP1 | BARD1 | ENSPCAP00000005209 | ENSPCAP00000014180 | BRCA1 interacting protein C-terminal helicase 1. | BRCA1 associated RING domain 1. | 0.950 |
BRIP1 | ENSPCAP00000010342 | ENSPCAP00000005209 | ENSPCAP00000010342 | BRCA1 interacting protein C-terminal helicase 1. | annotation not available | 0.947 |
BRIP1 | ENSPCAP00000012584 | ENSPCAP00000005209 | ENSPCAP00000012584 | BRCA1 interacting protein C-terminal helicase 1. | annotation not available | 0.989 |
BRIP1 | GTF2H1 | ENSPCAP00000005209 | ENSPCAP00000012438 | BRCA1 interacting protein C-terminal helicase 1. | General transcription factor IIH subunit 1. | 0.947 |
BRIP1 | GTF2H3 | ENSPCAP00000005209 | ENSPCAP00000013337 | BRCA1 interacting protein C-terminal helicase 1. | General transcription factor IIH subunit 3. | 0.946 |
BRIP1 | MLH1 | ENSPCAP00000005209 | ENSPCAP00000006159 | BRCA1 interacting protein C-terminal helicase 1. | mutL homolog 1. | 0.988 |
BRIP1 | PMS2 | ENSPCAP00000005209 | ENSPCAP00000003777 | BRCA1 interacting protein C-terminal helicase 1. | PMS1 homolog 2, mismatch repair system component. | 0.969 |
BRIP1 | SLF1 | ENSPCAP00000005209 | ENSPCAP00000003732 | BRCA1 interacting protein C-terminal helicase 1. | SMC5-SMC6 complex localization factor 1. | 0.996 |
BRIP1 | TOPBP1 | ENSPCAP00000005209 | ENSPCAP00000011418 | BRCA1 interacting protein C-terminal helicase 1. | DNA topoisomerase II binding protein 1. | 0.987 |
BRIP1 | WRN | ENSPCAP00000005209 | ENSPCAP00000013009 | BRCA1 interacting protein C-terminal helicase 1. | WRN RecQ like helicase. | 0.991 |
ENSPCAP00000010342 | BRIP1 | ENSPCAP00000010342 | ENSPCAP00000005209 | annotation not available | BRCA1 interacting protein C-terminal helicase 1. | 0.947 |
ENSPCAP00000010342 | GTF2H1 | ENSPCAP00000010342 | ENSPCAP00000012438 | annotation not available | General transcription factor IIH subunit 1. | 0.999 |
ENSPCAP00000010342 | GTF2H3 | ENSPCAP00000010342 | ENSPCAP00000013337 | annotation not available | General transcription factor IIH subunit 3. | 0.999 |
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