STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000006069annotation not available (599 aa)    
Predicted Functional Partners:
BBS9
Bardet-Biedl syndrome 9.
    
 0.721
TTC8
Tetratricopeptide repeat domain 8.
    
 0.700
ENSPCAP00000010752
annotation not available
    
 0.670
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.663
ENSPCAP00000002978
annotation not available
    
 0.635
ENSPCAP00000010772
annotation not available
    
 0.635
UBXN7
UBX domain protein 7.
    
  0.634
RBX1
Ring-box 1.
    
 0.608
CUL3
Cullin 3.
    
 0.605
CACUL1
CDK2 associated cullin domain 1.
    
 0.605
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.