STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTRA1HtrA serine peptidase 1. (484 aa)    
Predicted Functional Partners:
SCP2
Sterol carrier protein 2.
    
 0.977
XIAP
X-linked inhibitor of apoptosis.
    
 0.897
PSMD1
Proteasome 26S subunit, non-ATPase 1.
    
 0.849
PINK1
PTEN induced kinase 1.
    
 0.846
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.839
ENSPCAP00000007370
annotation not available
   
 0.822
PSMC6
Proteasome 26S subunit, ATPase 6.
    
 0.805
PSMC3
Proteasome 26S subunit, ATPase 3.
    
 0.805
PSMC4
Proteasome 26S subunit, ATPase 4.
    
 0.805
BIRC5
Baculoviral IAP repeat containing 5.
    
 0.801
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.