STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMS2LIM zinc finger domain containing 2. (336 aa)    
Predicted Functional Partners:
ILK
Integrin linked kinase.
   
 0.984
RSU1
Ras suppressor protein 1.
   
 0.981
PARVB
Parvin beta.
   
 0.895
PARVA
Parvin alpha.
   
 0.895
PARVG
Parvin gamma.
   
 0.879
NCK2
NCK adaptor protein 2.
    
 
 0.829
PIDD1
P53-induced death domain protein 1.
    
 0.827
ENSPCAP00000004275
annotation not available
   
 0.783
ENSPCAP00000004308
annotation not available
   
 0.783
POP7
POP7 homolog, ribonuclease P/MRP subunit.
   
 0.783
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.