STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCBP1Nuclear cap binding protein subunit 1. (790 aa)    
Predicted Functional Partners:
NCBP2
Nuclear cap binding protein subunit 2.
   
 0.999
SRRT
Serrate, RNA effector molecule.
   
 0.990
ALYREF
Aly/REF export factor.
    
 0.989
ENSPCAP00000010409
annotation not available
    
 0.988
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
    
 0.985
NELFE
Negative elongation factor complex member E.
    
 0.985
THOC2
THO complex 2.
    
 0.981
LSM10
LSM10, U7 small nuclear RNA associated.
    
 0.979
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
    
 0.979
RANBP2
RAN binding protein 2.
   
 0.977
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.