STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP53BP1Tumor protein p53 binding protein 1. (1970 aa)    
Predicted Functional Partners:
ENSPCAP00000001308
annotation not available
    
 0.991
ATR
ATR serine/threonine kinase.
    
 0.991
TOPBP1
DNA topoisomerase II binding protein 1.
    
 
 0.990
ATM
ATM serine/threonine kinase.
    
 0.987
XRCC6
X-ray repair cross complementing 6.
    
 0.977
PAXIP1
PAX interacting protein 1.
    
 0.967
TP53
Tumor protein p53.
    
 
 0.967
MDC1
Mediator of DNA damage checkpoint 1.
    
 0.967
SLF1
SMC5-SMC6 complex localization factor 1.
    
 0.966
ENSPCAP00000009431
annotation not available
    
 
 0.965
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.