STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN7Calpain 7. (778 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
 0.894
CAST
Calpastatin.
    
 0.782
PEF1
penta-EF-hand domain containing 1.
   
 0.692
SRI
Sorcin.
   
 0.689
GCA
Grancalcin.
   
 0.689
ENSPCAP00000010334
annotation not available
    
 
 0.646
TLN1
Talin 1.
    
 0.519
TLN2
Talin 2.
    
 0.519
OXNAD1
Oxidoreductase NAD binding domain containing 1.
      
 0.514
XIRP1
Xin actin binding repeat containing 1.
    
 
 0.510
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.