STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744655_00222Unannotated protein. (180 aa)    
Predicted Functional Partners:
GCA_000744655_06991
Unannotated protein.
  
 
 0.975
GCA_000744655_07726
Unannotated protein.
   
 0.821
GCA_000744655_00280
Unannotated protein.
  
     0.703
GCA_000744655_00497
Unannotated protein.
  
     0.695
GCA_000744655_00564
Unannotated protein.
  
     0.654
GCA_000744655_03447
Unannotated protein.
  
  
 0.644
GCA_000744655_06935
Unannotated protein.
  
 0.642
GCA_000744655_06986
Unannotated protein.
  
 0.642
GCA_000744655_00895
Unannotated protein.
     
 0.637
GCA_000744655_04111
Unannotated protein.
  
 0.597
Your Current Organism:
Streptacidiphilus rugosus
NCBI taxonomy Id: 981369
Other names: S. rugosus AM-16, Streptacidiphilus rugosus AM-16, Streptacidiphilus rugosus KCTC 19279, Streptacidiphilus rugosus str. AM-16, Streptacidiphilus rugosus strain AM-16, Streptacidiphilus sp. AM-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.