STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744655_04576Unannotated protein. (589 aa)    
Predicted Functional Partners:
GCA_000744655_04577
Unannotated protein.
   
 0.981
GCA_000744655_08107
Unannotated protein.
  
 
 0.892
GCA_000744655_08235
Unannotated protein.
  
 
  0.884
GCA_000744655_05521
Unannotated protein.
    
  0.878
GCA_000744655_05319
Unannotated protein.
    
 0.872
GCA_000744655_02117
Unannotated protein.
    
  0.859
GCA_000744655_04578
Unannotated protein.
    
  0.812
GCA_000744655_07581
Unannotated protein.
  
 
 0.805
GCA_000744655_04531
Unannotated protein.
  
 
 0.748
GCA_000744655_05572
Unannotated protein.
 
 
 0.602
Your Current Organism:
Streptacidiphilus rugosus
NCBI taxonomy Id: 981369
Other names: S. rugosus AM-16, Streptacidiphilus rugosus AM-16, Streptacidiphilus rugosus KCTC 19279, Streptacidiphilus rugosus str. AM-16, Streptacidiphilus rugosus strain AM-16, Streptacidiphilus sp. AM-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.