STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744655_08324Unannotated protein. (266 aa)    
Predicted Functional Partners:
GCA_000744655_08325
Unannotated protein.
 
     0.609
GCA_000744655_08053
Unannotated protein.
  
     0.515
GCA_000744655_03594
Unannotated protein.
  
    0.466
GCA_000744655_02761
Unannotated protein.
  
     0.460
GCA_000744655_07298
Unannotated protein.
  
     0.424
GCA_000744655_02801
Unannotated protein.
  
     0.413
Your Current Organism:
Streptacidiphilus rugosus
NCBI taxonomy Id: 981369
Other names: S. rugosus AM-16, Streptacidiphilus rugosus AM-16, Streptacidiphilus rugosus KCTC 19279, Streptacidiphilus rugosus str. AM-16, Streptacidiphilus rugosus strain AM-16, Streptacidiphilus sp. AM-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.