STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLV75_0053Unannotated protein; Belongs to the precorrin methyltransferase family. (264 aa)    
Predicted Functional Partners:
CLV75_0050
Unannotated protein; Catalyzes the methylation of C-1 in precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A.
 
 
 0.999
CLV75_0054
Unannotated protein.
 
 
 0.999
CLV75_0055
Unannotated protein.
 
 0.999
CLV75_0057
Unannotated protein.
 
 0.999
CLV75_0056
Unannotated protein.
 
 
 0.997
CLV75_0059
Unannotated protein.
 
 
 0.993
CLV75_0058
Unannotated protein; Belongs to the precorrin methyltransferase family.
 
 
 0.991
cobB-2
Unannotated protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.986
cobQ
Unannotated protein; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.970
cobD
Unannotated protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
  
 0.916
Your Current Organism:
Ruegeria conchae
NCBI taxonomy Id: 981384
Other names: JCM 17315, KACC 15115, R. conchae, Ruegeria conchae Lee et al. 2012, Ruegeria sp. TW15, strain TW15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.