STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLV75_0533Unannotated protein. (75 aa)    
Predicted Functional Partners:
CLV75_0534
Unannotated protein.
 
     0.905
CLV75_3468
Unannotated protein.
  
     0.525
CLV75_0820
Unannotated protein.
  
     0.517
CLV75_2252
Unannotated protein.
  
     0.483
CLV75_1838
Unannotated protein.
  
     0.455
CLV75_3077
Unannotated protein.
  
     0.451
CLV75_0452
Unannotated protein.
  
     0.416
CLV75_3735
Unannotated protein.
  
     0.412
CLV75_3591
Unannotated protein.
  
     0.407
Your Current Organism:
Ruegeria conchae
NCBI taxonomy Id: 981384
Other names: JCM 17315, KACC 15115, R. conchae, Ruegeria conchae Lee et al. 2012, Ruegeria sp. TW15, strain TW15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.