STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGPB_0336TetR family transcriptional regulator; Truncated conserved hypothetical protein. (185 aa)    
Predicted Functional Partners:
SGPB_1990
TetR family transcriptional regulator; Functional classification: COG1309(K).
  
     0.613
SGPB_1924
Toxic anion resistance protein; Functional classification: COG3853(P).
  
     0.594
SGPB_0337
DegV family protein; Functional classification: COG1307(S).
       0.582
SGPB_1033
TetR family transcriptional regulator; Functional classification: COG1309(K).
  
     0.557
SGPB_0014
Beta-lactamase; Functional classification: COG2367(V).
  
     0.529
SGPB_0121
Signal peptide containing protein.
  
     0.459
adcR
MarR family transcriptional regulator; Functional classification: COG1846(K).
  
   
 0.458
uidB
Glucuronide transporter; Functional classification: COG2211(G).
 
     0.434
Your Current Organism:
Streptococcus pasteurianus
NCBI taxonomy Id: 981540
Other names: S. pasteurianus ATCC 43144, Streptococcus gallolyticus subsp. pasteurianus ATCC 43144, Streptococcus pasteurianus ATCC 43144, Streptococcus pasteurianus CCUG 46074, Streptococcus pasteurianus str. ATCC 43144, Streptococcus pasteurianus strain ATCC 43144
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