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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXB_0484Cell division membrane protein; Belongs to the SEDS family. (397 aa)    
Predicted Functional Partners:
murF
UDP-N-acetylmuramyl pentapeptide synthase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
 
 
 0.904
OXB_1954
Penicillin-binding protein.
 
 0.896
OXB_2904
Penicillin-binding protein 2a.
 
 
 0.896
murC
UDP-N-acetylmuramate--l-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
  
 0.876
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
  
 0.845
ddl
D-alanine--D-alanine ligase b; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
  
 0.821
OXB_1955
Cell division protein ftsi.
 
 0.789
mraY
UDP-N-acetylmuramyl pentapeptide; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.779
OXB_3109
Rod shape-determining protein mreb.
 
 
 0.779
OXB_1451
Rod shape-determining protein mbl.
 
 
 0.773
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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