Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OXB_0643Germination-specific n-acetylmuramoyl-l-alanine. (237 aa)    
Predicted Functional Partners:
OXB_3083
Stage V sporulation protein b.
  
   
 0.837
OXB_1035
Spore protein yabp.
  
  
 0.824
OXB_0475
Outer membrane lipoprotein-sorting protein.
  
 
 
 0.815
OXB_0250
Xylanase/chitin deacetylase.
 
   
 0.765
OXB_1425
Hypothetical protein.
  
   
 0.747
OXB_2943
Stage IV sporulation protein.
  
   
 0.747
OXB_2299
Stage II sporulation protein; Belongs to the anti-sigma-factor antagonist family.
  
   
 0.739
OXB_0642
ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.720
OXB_2179
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.678
OXB_1448
Stage II sporulation protein d.
  
 0.660
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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