STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXB_0803Spore germination protein, gera family. (491 aa)    
Predicted Functional Partners:
OXB_0805
Germination protein.
 
  
 0.938
OXB_0804
Spore germination protein.
 
  
 0.921
OXB_1829
Stage V sporulation protein ad.
  
  
 0.800
OXB_1828
Stage V sporulation protein ac.
  
  
 0.798
gpr
Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.794
OXB_1425
Hypothetical protein.
 
    0.786
OXB_1830
Stage V sporulation protein ae.
  
  
 0.786
OXB_1031
Abrb family DNA-binding protein.
  
     0.772
OXB_2335
Stage IV sporulation protein a.
  
     0.772
OXB_2739
Stage IV sporulation protein b.
  
     0.772
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.