Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OXB_0809Putative chloromuconate cycloisomerase. (361 aa)    
Predicted Functional Partners:
OXB_0808
Polysugar degrading enzyme.
 
  
 0.924
OXB_3487
Mandelate racemase/muconate lactonizing protein.
  
  
 
0.911
OXB_0810
Peptidase.
 
    0.907
OXB_3552
NLP/P60 family protein.
 
  
 0.737
OXB_0807
acyl-CoA hydrolase.
       0.574
OXB_2702
Appr-1-p processing enzyme domain protein.
   
   0.400
OXB_2704
Small acid-soluble spore o family protein.
   
   0.400
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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