Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OXB_1122Hypothetical protein. (533 aa)    
Predicted Functional Partners:
OXB_1121
Elf family DNA-directed RNA polymerase sigma subunit sigw; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.919
OXB_0385
Hypothetical protein.
  
     0.723
OXB_2402
Hypothetical protein.
  
     0.714
OXB_1733
Sporulation protein.
  
     0.708
OXB_0339
Germ family spore germination protein.
  
     0.683
OXB_3384
Hypothetical protein.
  
    0.652
OXB_0902
Geranyltranstransferase.
  
     0.616
OXB_2647
Hypothetical protein.
  
     0.600
OXB_1585
DNA-directed RNA polymerase sigma subunit rpod; Belongs to the sigma-70 factor family.
 
 
 0.567
OXB_3376
Dual specificity protein phosphatase.
  
     0.565
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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