STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXB_1787Alpha-amylase. (481 aa)    
Predicted Functional Partners:
OXB_1762
Ethanolamine transporter.
  
 0.922
OXB_2187
ABC-type sugar transport systems, permease components.
 
  
 0.658
OXB_1924
Cytochrome C oxidase subunit 4b.
  
     0.640
OXB_1790
HAD superfamily hydrolase.
 
  
 0.617
OXB_0030
Putative uncharacterized protein.
  
     0.613
OXB_2333
Hypothetical protein.
  
     0.572
OXB_1082
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.548
OXB_0005
Transposase.
  
     0.533
OXB_2190
ABC transporter related protein; Belongs to the ABC transporter superfamily.
 
  
 0.528
OXB_2188
ABC transporter, permease protein.
 
  
 0.526
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.