STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXB_1925Cytochrome C oxidase subunit ctag. (311 aa)    
Predicted Functional Partners:
OXB_1924
Cytochrome C oxidase subunit 4b.
 
  
 0.981
OXB_1921
Heme/copper-type cytochrome/quinol oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
  
 0.967
OXB_1923
Heme/copper-type cytochrome/quinol oxidase.
 
  
 0.934
OXB_1922
Cytochrome C oxidase subunit i.
 
  
 0.895
OXB_1926
Membrane protein.
 
     0.887
OXB_2355
Menaquinol-cytochrome c reductase cytochrome b/c.
 
  
 0.840
OXB_1748
Cytochrome C-553.
 
  
 0.834
ctaA
Cytochrome aa3-controlling protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily.
 
   
 0.813
OXB_2928
Cytochrome C-551.
 
    0.779
OXB_1928
Ylba like protein.
  
     0.773
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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