Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OXB_2113Act domain-containing protein. (266 aa)    
Predicted Functional Partners:
OXB_2114
Transcription regulation protein.
  
    0.945
cinA
Putative competence-damage inducible protein; Belongs to the CinA family.
  
    0.871
OXB_2115
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.835
OXB_0057
Hypothetical protein.
  
     0.747
OXB_2110
Hypothetical protein.
       0.691
OXB_2111
Zinc protease l233.
       0.691
OXB_2519
Bps lyase heat family repeat protein.
  
     0.691
OXB_1386
Ywhd family protein.
  
     0.659
OXB_1770
Malate/lactate dehydrogenases.
  
     0.659
OXB_3199
Succinate dehydrogenase, cytochrome b subunit.
  
     0.651
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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