Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OXB_2164Sporulation protein yuza. (106 aa)    
Predicted Functional Partners:
OXB_2302
Stage V sporulation protein af.
 
     0.714
OXB_2739
Stage IV sporulation protein b.
  
    0.656
OXB_1830
Stage V sporulation protein ae.
  
     0.631
OXB_3293
Small acid-soluble spore protein alpha/beta.
  
    0.621
OXB_2335
Stage IV sporulation protein a.
  
     0.620
OXB_1828
Stage V sporulation protein ac.
  
     0.616
OXB_2204
Hypothetical protein.
  
    0.612
OXB_1035
Spore protein yabp.
  
     0.604
OXB_1829
Stage V sporulation protein ad.
  
     0.603
spoIIAB
Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
  
     0.602
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.