Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OXB_2255Alpha-methylacyl-coa racemase; Belongs to the CoA-transferase III family. (380 aa)    
Predicted Functional Partners:
OXB_2254
Hypothetical protein.
       0.773
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
     
 0.708
OXB_1250
acyl-CoA dehydrogenase.
 
 
 0.643
OXB_2793
3-hydroxy-3-methylglutaryl coenzyme a lyase.
 
 
 0.630
OXB_1249
3-hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.572
OXB_2145
Hydroxymethylglutaryl-coa lyase.
 
 
 0.567
OXB_2253
Pha synthase phac.
     
 0.550
OXB_1160
acyl-CoA dehydrogenase.
 
 
 0.503
OXB_1320
acyl-CoA dehydrogenase.
 
 
 0.484
OXB_0398
Acetolactate synthase; Belongs to the TPP enzyme family.
 
 
 0.474
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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