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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXB_2452Propeptide pepsy amd peptidase m4. (85 aa)    
Predicted Functional Partners:
OXB_0919
Predicted nucleotidyltransferases.
  
     0.586
msrA
Peptide-methionine (S)-s-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
   0.577
OXB_0382
Cell wall endopeptidase.
  
     0.541
OXB_0213
Hemolysin-like protein.
  
    0.537
OXB_1086
Drug/metabolite transporter superfamily.
  
    0.519
OXB_2453
Beta-lactamase.
   
   0.508
OXB_2222
Predicted protein.
  
     0.435
OXB_2047
Hypothetical protein.
  
   
 0.421
OXB_0918
Excinuclease ABC c subunit domain-containing.
 
     0.414
OXB_1272
ABC-type antimicrobial peptide transport system, permease component.
  
    0.405
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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