STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXB_2829Hypothetical protein. (119 aa)    
Predicted Functional Partners:
OXB_2828
Hypothetical protein.
       0.773
OXB_2823
Phage protein.
       0.580
OXB_2825
Phage cell wall hydrolase.
       0.580
OXB_2826
Muramidase-2.
       0.580
OXB_2822
Phage tail protein.
       0.575
OXB_2824
Hypothetical protein.
       0.575
OXB_2827
Phage-related minor tail protein.
       0.574
OXB_2821
Hypothetical protein.
       0.573
OXB_2819
Hypothetical protein.
       0.543
OXB_2820
Tail fiber protein.
       0.543
Your Current Organism:
Bacillus sp. OxB1
NCBI taxonomy Id: 98228
Other names: B. sp. OxB-1, Bacillus sp. OxB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.